Metric availability by backend
Metric configuration keys are backend-specific. Each cell contains the exact
key to place under metrics in the YAML file. An em dash means that the backend
does not expose that metric.
| Metric | AUDIT | pymia | Metrics Reloaded |
|---|---|---|---|
| Dice coefficient | dice |
dice |
dsc |
| Jaccard / Intersection over Union | jaccard |
jacc |
iou |
| Accuracy | accuracy |
accu |
accuracy |
| Precision / Positive Predictive Value | precision |
prec |
ppv |
| Sensitivity / Recall | sensitivity |
sens |
sensitivity |
| Specificity | specificity |
spec |
specificity |
| Hausdorff distance (maximum) | hausdorff_distance |
haus |
hd |
| Predicted physical area/volume | predicted_size |
pred_vol |
— |
| Reference physical area/volume | — | ref_vol |
— |
| Number of predicted pixels/voxels | — | — | numb_pred |
| Number of reference pixels/voxels | — | — | numb_ref |
| True positives | — | tp |
numb_tp |
| False positives | — | fp |
numb_fp |
| False negatives | — | fn |
numb_fn |
| True negatives | — | tn |
— |
| F-measure / F-beta | — | fmeas |
fbeta |
| Cohen's kappa | — | ckc |
cohens_kappa |
| Adjusted Rand Index | — | ari |
— |
| Area Under Curve | — | auc |
— |
| Interclass Correlation | — | ic |
— |
| Mutual Information | — | mi |
— |
| Rand Index | — | rand |
— |
| Surface Dice Overlap | — | sdo |
— |
| Surface Overlap | — | so |
— |
| Volume Similarity | — | vs |
— |
| Average Distance | — | avd |
— |
| Mahalanobis Distance | — | mahal |
— |
| Variation of Information | — | vi |
— |
| Global Consistency Error | — | gce |
— |
| Probabilistic Distance | — | prob |
— |
| Fallout | — | fallout |
— |
| False Negative Rate | — | fnr |
— |
| Balanced Accuracy | — | — | ba |
| Weighted Cohen's Kappa | — | — | wck |
| Positive Likelihood Ratio | — | — | lr+ |
| Youden Index | — | — | youden_ind |
| Negative Predictive Value | — | — | npv |
| Intersection over Reference | — | — | ior |
| Matthews Correlation Coefficient | — | — | mcc |
| Net Benefit | — | — | nb |
| Normalised Expected Cost | — | — | ec |
| Centreline Dice | — | — | cldice |
| Average Symmetric Surface Distance | — | — | assd |
| Mean Average Surface Distance | — | — | masd |
| Hausdorff Distance Percentile | — | — | hd_perc |
| Normalized Surface Distance | — | — | nsd |
| Boundary IoU | — | — | boundary_iou |
| Absolute Volume Difference Ratio | — | — | avdr |
predicted_size and pred_vol include image spacing. numb_pred is a raw
pixel/voxel count, so these values coincide only when the spacing product is
one.
pymia's avd, Metrics Reloaded's assd, and masd are shown on separate rows
because their surface-distance definitions are not interchangeable.
Metrics Reloaded also implements probability, calibration, detection, and instance-segmentation metrics. They are not marked as available because AUDIT's current metric pipeline accepts discrete segmentation masks, not the probability maps or instance assignments those metric families require.